An unusual overrepresentation of genetic factors related to iron homeostasis in the genome of the fluorescent Pseudomonas sp. ABC1

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Valenzuela-Heredia, D.; Henríquez-Castillo, C.; Donoso, R.; Lavín, P.; Ringel, M.T. et al.: An unusual overrepresentation of genetic factors related to iron homeostasis in the genome of the fluorescent Pseudomonas sp. ABC1. In: Microbial Biotechnology 14 (2021), Nr. 3, S. 1060-1072. DOI: https://doi.org/10.1111/1751-7915.13753

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To cite the version in the repository, please use this identifier: https://doi.org/10.15488/12276

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Abstract: 
Members of the genus Pseudomonas inhabit diverse environments, such as soil, water, plants and humans. The variability of habitats is reflected in the diversity of the structure and composition of their genomes. This cosmopolitan bacterial genus includes species of biotechnological, medical and environmental importance. In this study, we report on the most relevant genomic characteristics of Pseudomonas sp. strain ABC1, a siderophore-producing fluorescent strain recently isolated from soil. Phylogenomic analyses revealed that this strain corresponds to a novel species forming a sister clade of the recently proposed Pseudomonas kirkiae. The genomic information reveals an overrepresented repertoire of mechanisms to hoard iron when compared to related strains, including a high representation of fecI-fecR family genes related to iron regulation and acquisition. The genome of the Pseudomonas sp. ABC1 contains the genes for non-ribosomal peptide synthetases (NRPSs) of a novel putative Azotobacter-related pyoverdine-type siderophore, a yersiniabactin-type siderophore and an antimicrobial betalactone; the last two are found only in a limited number of Pseudomonas genomes. Strain ABC1 can produce siderophores in a low-cost medium, and the supernatants from cultures of this strain promote plant growth, highlighting their biotechnological potential as a sustainable industrial microorganism. © 2021 The Authors. Microbial Biotechnology published by Society for Applied Microbiology and John Wiley & Sons Ltd.
License of this version: CC BY 4.0 Unported
Document Type: Article
Publishing status: publishedVersion
Issue Date: 2021
Appears in Collections:Naturwissenschaftliche Fakultät

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pos. country downloads
total perc.
1 image of flag of Germany Germany 28 43.08%
2 image of flag of United States United States 21 32.31%
3 image of flag of China China 4 6.15%
4 image of flag of Italy Italy 2 3.08%
5 image of flag of France France 2 3.08%
6 image of flag of Taiwan Taiwan 1 1.54%
7 image of flag of Sweden Sweden 1 1.54%
8 image of flag of Mexico Mexico 1 1.54%
9 image of flag of Iran, Islamic Republic of Iran, Islamic Republic of 1 1.54%
10 image of flag of Ireland Ireland 1 1.54%
    other countries 3 4.62%

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